Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm23834-201ENSMUST00000104436 129 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm11865-201ENSMUST00000118093 859 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm15484-201ENSMUST00000118871 828 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm14465-201ENSMUST00000120603 567 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm15362-201ENSMUST00000121459 388 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm16026-205ENSMUST00000162923 641 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Mir199b-201ENSMUST00000175066 110 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm28894-201ENSMUST00000185214 615 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm37369-201ENSMUST00000194179 615 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm43812-202ENSMUST00000202701 581 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm34424-201ENSMUST00000213400 782 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Olfr683-201ENSMUST00000061284 960 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm45360-201ENSMUST00000210698 1405 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.93□□□□□ -1.14
Trim9Q8C7M3 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm12944-201ENSMUST00000119262 463 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm12331-201ENSMUST00000119927 622 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm14990-201ENSMUST00000122354 445 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm23740-201ENSMUST00000157385 100 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm23139-201ENSMUST00000179454 132 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Mir6972-201ENSMUST00000184774 64 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm21139-201ENSMUST00000186594 877 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm8101-201ENSMUST00000192796 478 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm37689-201ENSMUST00000193139 275 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm42573-201ENSMUST00000202327 478 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm45072-201ENSMUST00000208673 929 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Trim9Q8C7M3 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms