Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 AC159195.2-201ENSMUST00000223670 3757 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm232-201ENSMUST00000216549 2559 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Grik1-210ENSMUST00000228034 2708 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm22707-201ENSMUST00000103834 110 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm14727-201ENSMUST00000118526 525 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm14721-201ENSMUST00000121381 525 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm7244-201ENSMUST00000164658 455 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 n-R5s93-201ENSMUST00000180091 119 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm17786-201ENSMUST00000182000 427 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm18848-201ENSMUST00000182069 792 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm43595-201ENSMUST00000196464 1071 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 AC151971.2-201ENSMUST00000217540 909 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm9800-201ENSMUST00000052615 336 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm25189-201ENSMUST00000083911 164 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 AC129308.1-201ENSMUST00000223800 2309 ntBASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 CT009757.6-201ENSMUST00000220661 2312 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm37653-201ENSMUST00000195401 3578 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm25916-201ENSMUST00000104263 131 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm15105-201ENSMUST00000117777 204 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm5787-201ENSMUST00000183049 1038 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm37669-201ENSMUST00000192184 820 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm20223-201ENSMUST00000199932 805 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm7943-201ENSMUST00000212078 1034 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm8275-201ENSMUST00000219732 424 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 AC157212.1-201ENSMUST00000228398 1075 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm43099-201ENSMUST00000198943 5241 ntBASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc60Q8C4J0 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm44669-201ENSMUST00000207774 1969 ntBASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc60Q8C4J0 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms