Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm24519-201ENSMUST00000104507 132 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm12740-201ENSMUST00000118794 308 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm14251-201ENSMUST00000122133 279 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm23657-201ENSMUST00000122623 294 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm4613-201ENSMUST00000165488 276 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm17212-201ENSMUST00000166666 259 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm27156-201ENSMUST00000184589 754 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29048-201ENSMUST00000185342 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29403-201ENSMUST00000185491 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28234-201ENSMUST00000185657 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28248-201ENSMUST00000186093 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29633-202ENSMUST00000186217 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28829-201ENSMUST00000186231 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28261-201ENSMUST00000186417 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28815-201ENSMUST00000186751 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28608-201ENSMUST00000186860 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28122-201ENSMUST00000187088 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28420-201ENSMUST00000187340 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28106-201ENSMUST00000187640 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28698-201ENSMUST00000187734 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29224-201ENSMUST00000187965 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29189-201ENSMUST00000188018 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29476-201ENSMUST00000188397 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29505-201ENSMUST00000188424 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28125-201ENSMUST00000188470 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29391-201ENSMUST00000188545 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29280-201ENSMUST00000188571 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28349-201ENSMUST00000188590 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29652-201ENSMUST00000188622 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28819-206ENSMUST00000188816 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29079-201ENSMUST00000188875 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28213-201ENSMUST00000189183 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29382-201ENSMUST00000189549 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29377-205ENSMUST00000189603 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28327-201ENSMUST00000189638 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28790-201ENSMUST00000189642 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28907-201ENSMUST00000189700 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29586-207ENSMUST00000189745 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29115-201ENSMUST00000189870 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28366-201ENSMUST00000190147 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29212-201ENSMUST00000190384 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29533-201ENSMUST00000190403 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28162-201ENSMUST00000190545 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29030-201ENSMUST00000190848 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28742-201ENSMUST00000191001 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28899-201ENSMUST00000191161 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29567-201ENSMUST00000191188 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28222-201ENSMUST00000191210 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28776-201ENSMUST00000191282 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29306-201ENSMUST00000191366 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29618-201ENSMUST00000191423 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28136-210ENSMUST00000191432 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm29251-201ENSMUST00000191480 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm28658-201ENSMUST00000191532 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm32180-201ENSMUST00000192415 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm30598-201ENSMUST00000192620 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm37620-201ENSMUST00000192910 501 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm37627-201ENSMUST00000194585 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm34274-201ENSMUST00000195825 615 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm18469-201ENSMUST00000208850 439 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 AC121997.2-202ENSMUST00000227158 939 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 AC154141.1-201ENSMUST00000208403 4136 ntBASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Usp40Q8BWR4 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Usp40Q8BWR4 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms