Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm19086-201ENSMUST00000190772 665 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm18192-201ENSMUST00000210174 941 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm8667-201ENSMUST00000211112 449 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm37082-201ENSMUST00000192629 1927 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm44843-201ENSMUST00000208320 1396 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm14356-201ENSMUST00000118322 869 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm1947-201ENSMUST00000122451 910 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm24551-201ENSMUST00000158645 92 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Mir6922-201ENSMUST00000185099 66 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm3544-201ENSMUST00000196129 305 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm18329-201ENSMUST00000215832 589 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm18292-201ENSMUST00000216673 919 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm40853-201ENSMUST00000221342 582 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm9255-201ENSMUST00000223225 581 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 AC162857.1-201ENSMUST00000226614 400 ntBASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Gm28047Q3US59 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.04
Gm28047Q3US59 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.58□□□□□ -1.04
Gm28047Q3US59 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Gm28047Q3US59 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.58□□□□□ -1.04
Gm28047Q3US59 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm12593-201ENSMUST00000120981 743 ntBASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm14212-201ENSMUST00000122023 826 ntBASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.58□□□□□ -1.04
Gm28047Q3US59 Gm24011-201ENSMUST00000157732 268 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms