Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Smarcc1P97496 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Smarcc1P97496 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.25□□□□□ -0.93
Smarcc1P97496 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Smarcc1P97496 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm37535-201ENSMUST00000194442 2365 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm26144-201ENSMUST00000104475 132 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm12752-201ENSMUST00000121657 811 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm25505-201ENSMUST00000157220 246 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm7289-201ENSMUST00000168993 734 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm26528-201ENSMUST00000181965 283 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm10136-201ENSMUST00000183196 435 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm21877-201ENSMUST00000185640 694 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm37857-201ENSMUST00000191784 1199 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Ighv8-3-201ENSMUST00000194985 295 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.24□□□□□ -0.93
Smarcc1P97496 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm44607-201ENSMUST00000205611 1090 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 AC164424.3-201ENSMUST00000220809 148 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm7986-201ENSMUST00000221336 551 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm10126-201ENSMUST00000221732 168 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 AC166358.8-201ENSMUST00000223288 105 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 AC124739.1-201ENSMUST00000223433 148 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 AL671874.1-201ENSMUST00000223746 1123 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 AC125539.1-202ENSMUST00000226449 670 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Gm18259-201ENSMUST00000220991 2010 ntBASIC9.24□□□□□ -0.93
Smarcc1P97496 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC9.24□□□□□ -0.93
Smarcc1P97496 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smarcc1P97496 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.23□□□□□ -0.93
Smarcc1P97496 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.23□□□□□ -0.93
Smarcc1P97496 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm14869-201ENSMUST00000119007 884 ntBASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm13282-201ENSMUST00000121577 545 ntBASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm14847-201ENSMUST00000121978 519 ntBASIC9.23□□□□□ -0.93
Smarcc1P97496 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms