Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.9□□□□□ -1.14
CiitaP79621 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CiitaP79621 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CiitaP79621 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CiitaP79621 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CiitaP79621 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.9□□□□□ -1.15
CiitaP79621 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CiitaP79621 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
CiitaP79621 Gm14802-201ENSMUST00000121944 1885 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CiitaP79621 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Gm22707-201ENSMUST00000103834 110 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.89□□□□□ -1.15
CiitaP79621 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm12635-201ENSMUST00000117285 752 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm11903-201ENSMUST00000118958 727 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm16284-201ENSMUST00000140995 400 ntBASIC7.89□□□□□ -1.15
CiitaP79621 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Gm16026-205ENSMUST00000162923 641 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CiitaP79621 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.89□□□□□ -1.15
CiitaP79621 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC7.89□□□□□ -1.15
CiitaP79621 Ighv1-21-201ENSMUST00000194856 351 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm43656-201ENSMUST00000197882 434 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.89□□□□□ -1.15
CiitaP79621 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
CiitaP79621 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
CiitaP79621 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CiitaP79621 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CiitaP79621 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CiitaP79621 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CiitaP79621 Gm43331-201ENSMUST00000197991 1689 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.89□□□□□ -1.15
CiitaP79621 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
CiitaP79621 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Gm13423-201ENSMUST00000117205 888 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Gm22262-201ENSMUST00000158713 86 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Mir1930-201ENSMUST00000158799 84 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Gm16027-201ENSMUST00000161618 758 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CiitaP79621 Gm20690-201ENSMUST00000177341 315 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Gm7412-201ENSMUST00000191692 605 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CiitaP79621 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.88□□□□□ -1.15
CiitaP79621 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CiitaP79621 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CiitaP79621 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.88□□□□□ -1.15
CiitaP79621 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CiitaP79621 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CiitaP79621 AC118639.1-203ENSMUST00000228425 2016 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms