Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm44242-201ENSMUST00000204212 2721 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Ighv1-67-201ENSMUST00000103538 294 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm7785-201ENSMUST00000117121 892 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm11969-201ENSMUST00000118848 356 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm12967-201ENSMUST00000122147 289 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm13828-201ENSMUST00000122278 363 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm24994-201ENSMUST00000157414 121 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Mir1968-201ENSMUST00000157429 68 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm22116-201ENSMUST00000158791 141 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Pisrt1-201ENSMUST00000195532 515 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm42959-201ENSMUST00000202184 212 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 AC092710.1-201ENSMUST00000221005 192 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Hmgb1P63158 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.33□□□□□ -1.08
Hmgb1P63158 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Hmgb1P63158 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm25232-201ENSMUST00000104502 132 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm25721-201ENSMUST00000157496 171 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Traj54-201ENSMUST00000165071 54 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm6838-201ENSMUST00000172851 582 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm22923-201ENSMUST00000174952 110 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm9399-201ENSMUST00000175771 639 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm26269-201ENSMUST00000180144 126 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm20940-201ENSMUST00000197308 360 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm43235-201ENSMUST00000200121 297 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm3321-201ENSMUST00000200603 1129 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm18995-201ENSMUST00000202981 520 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 CT954323.2-201ENSMUST00000222056 213 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm37775-201ENSMUST00000194120 2313 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Hmgb1P63158 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Hmgb1P63158 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.32□□□□□ -1.08
Hmgb1P63158 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms