Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm26179-201ENSMUST00000177723 132 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm5272-201ENSMUST00000182730 982 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Ighv5-5-201ENSMUST00000193826 329 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm45432-201ENSMUST00000210391 416 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.76□□□□□ -1.17
Shmt1P50431 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Shmt1P50431 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.75□□□□□ -1.17
Shmt1P50431 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Shmt1P50431 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm25281-201ENSMUST00000157270 104 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Gm5277-201ENSMUST00000164923 556 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm28416-201ENSMUST00000188334 292 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Gm29288-201ENSMUST00000191582 901 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Gm37215-201ENSMUST00000194927 1259 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm5305-201ENSMUST00000204010 746 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC7.75□□□□□ -1.17
Shmt1P50431 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm2398-201ENSMUST00000218347 883 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.75□□□□□ -1.17
Shmt1P50431 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 AC158142.3-201ENSMUST00000226230 675 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Shmt1P50431 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Shmt1P50431 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Gm44093-201ENSMUST00000204381 1802 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.75□□□□□ -1.17
Shmt1P50431 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.75□□□□□ -1.17
Shmt1P50431 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Shmt1P50431 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Shmt1P50431 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Shmt1P50431 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Shmt1P50431 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms