Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp4P35123 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 AC153143.1-201ENSMUST00000222966 1340 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Usp4P35123 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm23706-201ENSMUST00000104369 82 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Gm25317-201ENSMUST00000116824 129 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm14579-201ENSMUST00000117068 283 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm12306-201ENSMUST00000117256 171 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm6382-201ENSMUST00000118873 942 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm12993-201ENSMUST00000119900 479 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm25332-201ENSMUST00000158038 105 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm24738-201ENSMUST00000158856 123 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Gm17149-201ENSMUST00000164712 375 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm28341-201ENSMUST00000190883 472 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm37641-201ENSMUST00000193837 239 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Mir7230-201ENSMUST00000195977 56 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp4P35123 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm45299-201ENSMUST00000210199 420 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 AC153529.1-201ENSMUST00000217818 370 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm18243-201ENSMUST00000220756 887 ntBASIC7.81□□□□□ -1.16
Usp4P35123 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.81□□□□□ -1.16
Usp4P35123 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.81□□□□□ -1.16
Usp4P35123 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Usp4P35123 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.81□□□□□ -1.16
Usp4P35123 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp4P35123 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp4P35123 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp4P35123 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp4P35123 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
Usp4P35123 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.8□□□□□ -1.16
Usp4P35123 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp4P35123 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Usp4P35123 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC7.8□□□□□ -1.16
Usp4P35123 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms