Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
P20040 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
P20040 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
P20040 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
P20040 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
P20040 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
P20040 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
P20040 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.42□□□□□ -1.38
P20040 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
P20040 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.42□□□□□ -1.38
P20040 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
P20040 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.41□□□□□ -1.38
P20040 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
P20040 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
P20040 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
P20040 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.41□□□□□ -1.38
P20040 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
P20040 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.41□□□□□ -1.38
P20040 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.41□□□□□ -1.38
P20040 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
P20040 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.41□□□□□ -1.38
P20040 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
P20040 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
P20040 Gm24986-201ENSMUST00000104452 132 ntBASIC6.41□□□□□ -1.38
P20040 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm12754-201ENSMUST00000121908 454 ntBASIC6.41□□□□□ -1.38
P20040 Gm15501-202ENSMUST00000140687 625 ntBASIC6.41□□□□□ -1.38
P20040 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.41□□□□□ -1.38
P20040 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
P20040 Gm29435-201ENSMUST00000191310 689 ntBASIC6.41□□□□□ -1.38
P20040 Trbv9-201ENSMUST00000194494 290 ntBASIC6.41□□□□□ -1.38
P20040 Gm43212-201ENSMUST00000198208 394 ntBASIC6.41□□□□□ -1.38
P20040 Gm43108-201ENSMUST00000200525 293 ntBASIC6.41□□□□□ -1.38
P20040 Gm44380-201ENSMUST00000203125 293 ntBASIC6.41□□□□□ -1.38
P20040 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.41□□□□□ -1.38
P20040 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.41□□□□□ -1.38
P20040 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.41□□□□□ -1.38
P20040 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.41□□□□□ -1.38
P20040 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.41□□□□□ -1.38
P20040 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.41□□□□□ -1.38
P20040 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.41□□□□□ -1.38
P20040 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.41□□□□□ -1.38
P20040 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
P20040 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
P20040 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
P20040 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.41□□□□□ -1.38
P20040 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.41□□□□□ -1.38
P20040 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
P20040 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
P20040 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
P20040 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
P20040 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
P20040 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.41□□□□□ -1.38
P20040 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
P20040 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
P20040 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
P20040 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
P20040 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
P20040 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
P20040 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.4□□□□□ -1.38
P20040 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
P20040 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.4□□□□□ -1.38
P20040 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.4□□□□□ -1.38
P20040 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
P20040 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms