Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 AC124395.1-201ENSMUST00000225940 707 ntBASIC9.35□□□□□ -0.91
Hoxc9P09633 Gm2840-201ENSMUST00000048361 411 ntBASIC9.35□□□□□ -0.91
Hoxc9P09633 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC9.35□□□□□ -0.91
Hoxc9P09633 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Hoxc9P09633 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Hoxc9P09633 Gm17841-201ENSMUST00000210711 2425 ntBASIC9.35□□□□□ -0.91
Hoxc9P09633 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Hoxc9P09633 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.35□□□□□ -0.91
Hoxc9P09633 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Hoxc9P09633 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm16073-201ENSMUST00000116032 517 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm12573-201ENSMUST00000118158 286 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm6654-201ENSMUST00000118950 348 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm14070-201ENSMUST00000120773 428 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm16057-201ENSMUST00000120811 759 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm15596-201ENSMUST00000121139 784 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm15349-201ENSMUST00000121154 204 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm22024-201ENSMUST00000122733 287 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm21877-201ENSMUST00000185640 694 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm38068-201ENSMUST00000192546 540 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm43048-201ENSMUST00000196101 388 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC9.34□□□□□ -0.91
Hoxc9P09633 AC174082.2-201ENSMUST00000222094 543 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 AC133203.1-201ENSMUST00000228241 301 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 AC123665.3-201ENSMUST00000228735 1216 ntBASIC9.34□□□□□ -0.91
Hoxc9P09633 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Hoxc9P09633 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Hoxc9P09633 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Mir697-201ENSMUST00000102316 109 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm14865-201ENSMUST00000117523 494 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm6451-201ENSMUST00000121488 717 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC9.33□□□□□ -0.92
Hoxc9P09633 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm28958-201ENSMUST00000185864 703 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm44943-201ENSMUST00000207254 300 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm44565-201ENSMUST00000208194 269 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.33□□□□□ -0.92
Hoxc9P09633 AC152922.1-201ENSMUST00000216518 1232 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Mir106b-201ENSMUST00000083580 82 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm13615-201ENSMUST00000120242 1612 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.33□□□□□ -0.92
Hoxc9P09633 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Hoxc9P09633 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Hoxc9P09633 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Hoxc9P09633 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Hoxc9P09633 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms