Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm8952-201ENSMUST00000206828 1102 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm45925-202ENSMUST00000219904 1136 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm5564-201ENSMUST00000034916 967 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm25129-201ENSMUST00000082651 133 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hmgb3O54879 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 AC129308.1-201ENSMUST00000223800 2309 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm19801-201ENSMUST00000218231 1882 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC5.82□□□□□ -1.48
Hmgb3O54879 AC158537.1-201ENSMUST00000224637 1711 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC5.82□□□□□ -1.48
Hmgb3O54879 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Phf7-206ENSMUST00000228437 1373 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm13254-201ENSMUST00000118295 654 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm13915-201ENSMUST00000119314 931 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm12967-201ENSMUST00000122147 289 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm24994-201ENSMUST00000157414 121 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm6428-201ENSMUST00000161062 345 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm37295-201ENSMUST00000192186 109 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm36935-201ENSMUST00000192526 292 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 AC132384.1-201ENSMUST00000219908 1195 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 AC154382.1-201ENSMUST00000220958 1282 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm18362-201ENSMUST00000221786 529 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 AC129975.2-201ENSMUST00000223705 775 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 AC118249.1-201ENSMUST00000224822 608 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 AC207128.1-201ENSMUST00000225928 799 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Elobl-202ENSMUST00000082339 300 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Hmgb3O54879 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.82□□□□□ -1.48
Hmgb3O54879 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm24938-201ENSMUST00000102225 110 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Mir675-201ENSMUST00000102320 84 ntBASIC5.81□□□□□ -1.48
Hmgb3O54879 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Hmgb3O54879 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Hmgb3O54879 Gm9095-201ENSMUST00000117607 881 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms