Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC154028.1-201ENSMUST00000217071 379 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 AC165157.2-201ENSMUST00000222265 367 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm6195-201ENSMUST00000063059 357 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Cldn34b1-201ENSMUST00000096852 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm4275-205ENSMUST00000212624 1436 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm45807-201ENSMUST00000209142 2874 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 AC154681.1-201ENSMUST00000225876 1735 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm2233-201ENSMUST00000222566 1916 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm28229-201ENSMUST00000188747 2153 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm20501-202ENSMUST00000211303 2194 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Mir582-201ENSMUST00000103758 81 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm14007-201ENSMUST00000118288 210 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm9434-201ENSMUST00000118975 813 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm13161-201ENSMUST00000120609 559 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm5389-201ENSMUST00000120893 1176 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm22198-201ENSMUST00000122659 307 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm8778-201ENSMUST00000127246 1107 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm15646-201ENSMUST00000143317 766 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Kcnd3os-202ENSMUST00000143893 718 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm9064-201ENSMUST00000163579 566 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm18191-201ENSMUST00000174624 824 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm25193-201ENSMUST00000176615 97 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm22392-201ENSMUST00000177971 107 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm5473-201ENSMUST00000179326 642 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm21241-201ENSMUST00000179551 934 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm12424-201ENSMUST00000179673 447 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm3839-201ENSMUST00000181173 1712 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Ccser2-209ENSMUST00000183038 1681 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm23786-202ENSMUST00000200181 119 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm43413-201ENSMUST00000200411 1566 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Ighv1-86-201ENSMUST00000200562 353 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm6375-201ENSMUST00000205201 1145 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm38405-201ENSMUST00000207760 1140 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm18639-201ENSMUST00000210442 1769 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 AC134607.1-201ENSMUST00000214707 485 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 4930533K18Rik-203ENSMUST00000219192 1307 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim39Q9ESN2 Gm18960-201ENSMUST00000222962 713 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 AL590614.1-201ENSMUST00000226037 268 ntBASIC7.65□□□□□ -1.18
Trim39Q9ESN2 AC152394.2-202ENSMUST00000228503 1064 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms