Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm14621-201ENSMUST00000117709 689 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm11922-201ENSMUST00000118967 475 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm13921-201ENSMUST00000119411 463 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm11955-201ENSMUST00000119801 470 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm13207-201ENSMUST00000119862 773 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm13586-201ENSMUST00000121784 464 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm371-201ENSMUST00000142240 1245 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm6799-201ENSMUST00000186919 573 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm28728-201ENSMUST00000189087 405 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm28864-201ENSMUST00000189251 644 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm28341-201ENSMUST00000190883 472 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm43848-201ENSMUST00000198060 1247 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm26413-202ENSMUST00000198972 127 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm43840-201ENSMUST00000199444 484 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm5317-201ENSMUST00000204445 847 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm7769-201ENSMUST00000212900 933 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm18914-201ENSMUST00000214625 616 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC152922.1-201ENSMUST00000216518 1232 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Gm6906-201ENSMUST00000218014 569 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC121947.1-201ENSMUST00000221755 1145 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC158531.2-201ENSMUST00000224264 473 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC117656.3-204ENSMUST00000225656 859 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC154806.1-203ENSMUST00000227370 1032 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 AC107452.2-201ENSMUST00000228415 363 ntBASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ube3bQ9ES34 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm4849-201ENSMUST00000188428 2246 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 AC183268.1-201ENSMUST00000215753 2837 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm19409-201ENSMUST00000198244 2858 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm6729-201ENSMUST00000165173 1452 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm14786-201ENSMUST00000117127 944 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm11969-201ENSMUST00000118848 356 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm15572-201ENSMUST00000119248 593 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm15361-201ENSMUST00000119320 444 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Mup-ps13-201ENSMUST00000120662 545 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm15038-201ENSMUST00000122144 296 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Scarna17-201ENSMUST00000158064 79 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm9064-201ENSMUST00000163579 566 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm7393-201ENSMUST00000172650 739 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm19203-201ENSMUST00000174049 939 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm21241-201ENSMUST00000179551 934 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm26269-201ENSMUST00000180144 126 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm7560-201ENSMUST00000187748 873 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm38146-201ENSMUST00000194121 1293 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm37339-201ENSMUST00000194142 392 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm42760-201ENSMUST00000199814 311 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm44654-201ENSMUST00000208052 329 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 AC133176.1-201ENSMUST00000226668 219 ntBASIC9.56□□□□□ -0.88
Ube3bQ9ES34 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Ube3bQ9ES34 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms