Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm44356-201ENSMUST00000196731 111 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm42804-201ENSMUST00000199701 178 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm44722-201ENSMUST00000206473 436 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Klf10-202ENSMUST00000226363 2917 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm15842-201ENSMUST00000120513 618 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm11188-201ENSMUST00000122382 388 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm8577-201ENSMUST00000122420 986 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm6931-201ENSMUST00000183103 371 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Mir6409-201ENSMUST00000184957 92 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm27458-201ENSMUST00000185108 121 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm6472-202ENSMUST00000187973 582 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm20136-201ENSMUST00000207501 891 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Grik1-209ENSMUST00000227986 2942 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.79□□□□□ -1.32
Cdc40Q9DC48 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm23323-201ENSMUST00000104471 133 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm6181-201ENSMUST00000117187 264 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm15913-201ENSMUST00000118492 331 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm24139-201ENSMUST00000122780 288 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Mir3078-201ENSMUST00000175231 87 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Gm7481-201ENSMUST00000182020 995 ntBASIC6.78□□□□□ -1.32
Cdc40Q9DC48 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms