Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Chmp2aQ9DB34 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.52□□□□□ -1.2
Chmp2aQ9DB34 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm17170-201ENSMUST00000112785 316 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm11517-201ENSMUST00000119491 387 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm2709-201ENSMUST00000142979 350 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm4308-201ENSMUST00000179735 914 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm27401-201ENSMUST00000184052 173 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm44258-201ENSMUST00000204925 301 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Chmp2aQ9DB34 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm22438-201ENSMUST00000104049 132 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Mir1981-201ENSMUST00000157934 82 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm23639-201ENSMUST00000175078 132 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm26179-201ENSMUST00000177723 132 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Mir8114-201ENSMUST00000183582 111 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm27596-201ENSMUST00000185061 83 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm28070-201ENSMUST00000191502 445 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm19035-202ENSMUST00000194575 959 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm6581-201ENSMUST00000214545 260 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm19217-201ENSMUST00000218238 328 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm32899-201ENSMUST00000219694 207 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.51□□□□□ -1.21
Chmp2aQ9DB34 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.5□□□□□ -1.21
Chmp2aQ9DB34 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms