Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 AC107763.1-202ENSMUST00000225021 2663 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm6181-201ENSMUST00000117187 264 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm5759-201ENSMUST00000119203 811 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm25178-201ENSMUST00000122633 325 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm9497-201ENSMUST00000199908 538 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm30196-201ENSMUST00000208957 160 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm9231-201ENSMUST00000220817 1009 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 AC146596.1-201ENSMUST00000223507 223 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Gm42611-201ENSMUST00000199446 3407 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 AC159002.2-201ENSMUST00000228843 4874 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm23079-201ENSMUST00000157847 117 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm7426-201ENSMUST00000179046 404 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm44760-201ENSMUST00000206375 1173 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 AC157650.2-201ENSMUST00000224666 328 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm9800-201ENSMUST00000052615 336 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Grik1-209ENSMUST00000227986 2942 ntBASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chmp4bQ9D8B3 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 Gm45221-201ENSMUST00000207822 2272 ntBASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 Gm44723-201ENSMUST00000207369 4000 ntBASIC9.15□□□□□ -0.95
Chmp4bQ9D8B3 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm11282-201ENSMUST00000119018 1416 ntBASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm4073-201ENSMUST00000176792 3500 ntBASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm22671-201ENSMUST00000104420 134 ntBASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm7991-201ENSMUST00000168668 591 ntBASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm6536-201ENSMUST00000171180 615 ntBASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Mir1231-201ENSMUST00000175639 81 ntBASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chmp4bQ9D8B3 Gm6610-201ENSMUST00000186324 358 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 373.1 ms