Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Brf1Q8CFK2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm13940-201ENSMUST00000121023 301 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm5135-201ENSMUST00000121100 573 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm23657-201ENSMUST00000122623 294 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm18428-201ENSMUST00000194986 791 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm44979-201ENSMUST00000206218 287 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm19217-201ENSMUST00000218238 328 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Brf1Q8CFK2 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm44441-201ENSMUST00000203642 2475 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Mir688-201ENSMUST00000102055 75 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm15203-201ENSMUST00000117668 455 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm8812-201ENSMUST00000118496 412 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm23392-201ENSMUST00000157580 113 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm16026-205ENSMUST00000162923 641 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm23617-201ENSMUST00000175410 95 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm2840-201ENSMUST00000048361 411 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm8872-201ENSMUST00000197475 1341 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Grik1-210ENSMUST00000228034 2708 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Brf1Q8CFK2 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.68□□□□□ -1.02
Brf1Q8CFK2 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms