Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm37373-201ENSMUST00000194005 2812 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm15422-201ENSMUST00000117453 541 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm8662-201ENSMUST00000118644 574 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm13744-201ENSMUST00000118953 850 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm22342-201ENSMUST00000122647 298 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm24442-201ENSMUST00000157238 327 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm23762-201ENSMUST00000158348 106 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm20690-201ENSMUST00000177341 315 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm43203-201ENSMUST00000200130 558 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm45042-201ENSMUST00000207377 211 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm45446-201ENSMUST00000209348 216 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 AC069562.1-201ENSMUST00000224206 434 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Nup88Q8CEC0 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm25631-201ENSMUST00000104390 130 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm27001-201ENSMUST00000182252 936 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm44931-201ENSMUST00000206056 545 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm19007-201ENSMUST00000217746 874 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Nup88Q8CEC0 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Nup88Q8CEC0 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Nup88Q8CEC0 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Nup88Q8CEC0 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.52□□□□□ -1.05
Nup88Q8CEC0 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Nup88Q8CEC0 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms