Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm27018-201ENSMUST00000181136 225 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm40319-201ENSMUST00000199785 481 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm42573-201ENSMUST00000202327 478 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Olfr890-201ENSMUST00000079804 945 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Lrif1Q8CDD9 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm12632-201ENSMUST00000121223 495 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm23740-201ENSMUST00000157385 100 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm10012-202ENSMUST00000170379 372 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm4545-201ENSMUST00000190797 603 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm18752-201ENSMUST00000192876 608 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm38305-201ENSMUST00000194825 223 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm42424-201ENSMUST00000198319 376 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.13□□□□□ -1.27
Lrif1Q8CDD9 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.12□□□□□ -1.27
Lrif1Q8CDD9 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms