Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm13744-201ENSMUST00000118953 850 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm9381-201ENSMUST00000182285 1012 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm43664-201ENSMUST00000196038 734 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm44943-201ENSMUST00000207254 300 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm45100-201ENSMUST00000209153 391 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm38430-201ENSMUST00000209888 1240 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm37364-201ENSMUST00000192533 3920 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm37535-201ENSMUST00000194442 2365 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm42577-201ENSMUST00000201367 3211 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm22671-201ENSMUST00000104420 134 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm15739-201ENSMUST00000118049 872 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm13776-201ENSMUST00000122236 1261 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm25180-201ENSMUST00000157746 115 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Mir378d-201ENSMUST00000184232 110 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm29354-201ENSMUST00000187613 696 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm29369-201ENSMUST00000190674 615 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm37270-201ENSMUST00000194277 330 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm43725-201ENSMUST00000200122 369 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm8667-201ENSMUST00000211112 449 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 n-R5s29-201ENSMUST00000082836 119 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm37138-201ENSMUST00000194564 2089 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm42898-201ENSMUST00000200370 3073 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm28906-201ENSMUST00000191371 1779 ntBASIC9.12□□□□□ -0.95
Ccdc60Q8C4J0 Gm37745-201ENSMUST00000193304 8163 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm37040-201ENSMUST00000191740 1824 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm13798-201ENSMUST00000118285 139 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm13486-201ENSMUST00000119910 282 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Mir1981-201ENSMUST00000157934 82 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm5261-201ENSMUST00000185860 713 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm43147-201ENSMUST00000196944 542 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm17833-201ENSMUST00000197629 1065 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm5154-201ENSMUST00000203971 399 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm43926-201ENSMUST00000203978 430 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 AC187103.4-201ENSMUST00000225399 300 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm12919-201ENSMUST00000119855 1594 ntBASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc60Q8C4J0 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms