Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm22671-201ENSMUST00000104420 134 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm13878-201ENSMUST00000117986 577 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm9697-201ENSMUST00000147052 997 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm26323-201ENSMUST00000157743 175 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm16026-205ENSMUST00000162923 641 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm27019-201ENSMUST00000183056 404 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Mir6357-201ENSMUST00000184246 104 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm37328-201ENSMUST00000193191 640 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm43812-202ENSMUST00000202701 581 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm34424-201ENSMUST00000213400 782 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trub1Q8C0D0 AC140280.1-201ENSMUST00000227826 1847 ntBASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trub1Q8C0D0 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm17170-201ENSMUST00000112785 316 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm15484-201ENSMUST00000118871 828 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm12944-201ENSMUST00000119262 463 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm23740-201ENSMUST00000157385 100 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm8101-201ENSMUST00000192796 478 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm37689-201ENSMUST00000193139 275 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm43656-201ENSMUST00000197882 434 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm42558-201ENSMUST00000200982 265 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm42573-201ENSMUST00000202327 478 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Olfr683-201ENSMUST00000061284 960 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm22865-201ENSMUST00000083949 214 ntBASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trub1Q8C0D0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms