Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 AC133598.3-204ENSMUST00000224260 767 ntBASIC9.93□□□□□ -0.82
Trim35Q8C006 AC117656.1-201ENSMUST00000225826 339 ntBASIC9.93□□□□□ -0.82
Trim35Q8C006 Eras-201ENSMUST00000033500 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Gm26440-201ENSMUST00000082591 129 ntBASIC9.93□□□□□ -0.82
Trim35Q8C006 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Tmem248-201ENSMUST00000065329 3607 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Lpar1-204ENSMUST00000107574 3437 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Bhlhe40-201ENSMUST00000032194 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 AC139350.2-201ENSMUST00000226508 2331 ntBASIC9.93□□□□□ -0.82
Trim35Q8C006 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trim35Q8C006 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trim35Q8C006 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm20501-202ENSMUST00000211303 2194 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Arhgap28-203ENSMUST00000164647 2754 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm11221-201ENSMUST00000117230 597 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm24419-201ENSMUST00000157875 332 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm9359-201ENSMUST00000163721 1221 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm20091-201ENSMUST00000179683 189 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm7132-201ENSMUST00000182302 984 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm17799-201ENSMUST00000183270 667 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm10105-201ENSMUST00000184601 270 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm28391-201ENSMUST00000185202 379 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm29528-201ENSMUST00000186699 379 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm29526-201ENSMUST00000187217 379 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm28744-201ENSMUST00000189939 340 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm6008-201ENSMUST00000206542 874 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm44870-201ENSMUST00000207291 357 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 AC162387.1-201ENSMUST00000213369 213 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 AC166358.10-201ENSMUST00000220556 144 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm4883-201ENSMUST00000085702 528 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm42633-201ENSMUST00000198853 2764 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm45139-201ENSMUST00000206543 2057 ntBASIC9.92□□□□□ -0.82
Trim35Q8C006 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Ube2l3-202ENSMUST00000115699 2906 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim35Q8C006 4921515L22Rik-201ENSMUST00000218993 1537 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Asb3-201ENSMUST00000020551 3228 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim35Q8C006 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms