Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.65□□□□□ -1.19
Ccdc40Q8BI79 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Ccdc40Q8BI79 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
Ccdc40Q8BI79 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.65□□□□□ -1.19
Ccdc40Q8BI79 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm25273-201ENSMUST00000104295 115 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm14645-201ENSMUST00000118597 417 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm36991-201ENSMUST00000191800 648 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm18765-201ENSMUST00000203166 660 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm4953-201ENSMUST00000077309 483 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Mir24-2-201ENSMUST00000083607 107 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ccdc40Q8BI79 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm15913-201ENSMUST00000118492 331 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm25164-201ENSMUST00000158908 116 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm4781-201ENSMUST00000167995 781 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Mir3078-201ENSMUST00000175231 87 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm4545-201ENSMUST00000190797 603 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm7542-201ENSMUST00000201140 777 ntBASIC7.63□□□□□ -1.19
Ccdc40Q8BI79 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms