Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.12
Usp49Q6P9L4 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm25614-201ENSMUST00000104013 133 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm14202-201ENSMUST00000120121 311 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm23657-201ENSMUST00000122623 294 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm23139-201ENSMUST00000179454 132 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm21430-201ENSMUST00000182998 998 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm27373-201ENSMUST00000184017 184 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm28894-201ENSMUST00000185214 615 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm18501-201ENSMUST00000185363 664 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm29214-201ENSMUST00000190216 570 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm37369-201ENSMUST00000194179 615 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm37349-201ENSMUST00000194205 624 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm5708-201ENSMUST00000196289 886 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm44833-201ENSMUST00000208368 331 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Usp49Q6P9L4 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm14465-201ENSMUST00000120603 567 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm15362-201ENSMUST00000121459 388 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm12754-201ENSMUST00000121908 454 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm22604-201ENSMUST00000157604 311 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm27972-201ENSMUST00000184720 137 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm43040-201ENSMUST00000202399 558 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 AC126554.3-201ENSMUST00000223131 493 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.07□□□□□ -1.12
Usp49Q6P9L4 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Usp49Q6P9L4 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms