Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
AtmQ62388 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.62□□□□□ -1.35
AtmQ62388 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.62□□□□□ -1.35
AtmQ62388 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.62□□□□□ -1.35
AtmQ62388 Gm25904-201ENSMUST00000158491 143 ntBASIC6.62□□□□□ -1.35
AtmQ62388 Gm43089-201ENSMUST00000199162 275 ntBASIC6.62□□□□□ -1.35
AtmQ62388 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
AtmQ62388 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
AtmQ62388 Gm21731-201ENSMUST00000079524 489 ntBASIC6.62□□□□□ -1.35
AtmQ62388 Gm25515-201ENSMUST00000083858 157 ntBASIC6.62□□□□□ -1.35
AtmQ62388 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.62□□□□□ -1.35
AtmQ62388 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
AtmQ62388 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
AtmQ62388 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
AtmQ62388 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
AtmQ62388 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
AtmQ62388 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
AtmQ62388 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
AtmQ62388 Gm14733-201ENSMUST00000117680 133 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm12773-201ENSMUST00000120134 587 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm24228-201ENSMUST00000158829 129 ntBASIC6.61□□□□□ -1.35
AtmQ62388 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm28883-201ENSMUST00000189256 369 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm37265-201ENSMUST00000191698 885 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm45497-201ENSMUST00000211701 740 ntBASIC6.61□□□□□ -1.35
AtmQ62388 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.61□□□□□ -1.35
AtmQ62388 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm16415-201ENSMUST00000080097 489 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
AtmQ62388 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 AC105958.1-201ENSMUST00000214783 2144 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
AtmQ62388 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm14601-201ENSMUST00000120892 236 ntBASIC6.61□□□□□ -1.35
AtmQ62388 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm25435-201ENSMUST00000158277 267 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.61□□□□□ -1.35
AtmQ62388 Gm37463-201ENSMUST00000193819 796 ntBASIC6.61□□□□□ -1.35
AtmQ62388 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.61□□□□□ -1.35
AtmQ62388 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
AtmQ62388 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
AtmQ62388 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Gm43905-201ENSMUST00000204516 204 ntBASIC6.61□□□□□ -1.35
AtmQ62388 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.61□□□□□ -1.35
AtmQ62388 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.61□□□□□ -1.35
AtmQ62388 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
AtmQ62388 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
AtmQ62388 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
AtmQ62388 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.6□□□□□ -1.35
AtmQ62388 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
AtmQ62388 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms