Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Gm28047Q3US59 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.62□□□□□ -1.03
Gm28047Q3US59 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Gm28047Q3US59 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Gm28047Q3US59 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm14891-201ENSMUST00000117378 596 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm16418-201ENSMUST00000118577 171 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm14156-201ENSMUST00000121538 483 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm17129-201ENSMUST00000168168 505 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm4252-201ENSMUST00000174823 313 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm22408-201ENSMUST00000174925 65 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm6931-201ENSMUST00000183103 371 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm42431-201ENSMUST00000196880 323 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm43136-201ENSMUST00000200403 636 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm5307-201ENSMUST00000204772 760 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 AL935138.1-201ENSMUST00000215309 196 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm33778-201ENSMUST00000216884 704 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 AC153864.1-201ENSMUST00000218482 523 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm26437-201ENSMUST00000082595 105 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 AC132384.7-201ENSMUST00000220198 1391 ntBASIC8.61□□□□□ -1.03
Gm28047Q3US59 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.61□□□□□ -1.03
Gm28047Q3US59 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm14749-201ENSMUST00000121269 333 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm16407-201ENSMUST00000122134 567 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm23007-201ENSMUST00000158951 177 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Mir6415-201ENSMUST00000184064 100 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 Gm28011-201ENSMUST00000184097 175 ntBASIC8.6□□□□□ -1.03
Gm28047Q3US59 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Gm28047Q3US59 Mir6403-201ENSMUST00000185007 129 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 169.2 ms