Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm5711-201ENSMUST00000197896 421 ntBASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm43576-201ENSMUST00000197937 871 ntBASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Sv2b-201ENSMUST00000085164 5307 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm42981-201ENSMUST00000200184 3252 ntBASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Gm5120-201ENSMUST00000215231 2414 ntBASIC6.75□□□□□ -1.33
Spg11Q3UHA3 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gpatch2-208ENSMUST00000160570 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm42460-201ENSMUST00000198863 2567 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm43910-201ENSMUST00000204561 3241 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm13451-201ENSMUST00000117649 592 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm43012-201ENSMUST00000198569 937 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm18600-201ENSMUST00000207205 505 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm18405-201ENSMUST00000220743 511 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm7676-201ENSMUST00000084055 319 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Olfr656-201ENSMUST00000098172 991 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm2136-201ENSMUST00000193945 2577 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Nsun3-201ENSMUST00000063089 3813 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm42897-201ENSMUST00000201486 2112 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 C78859-201ENSMUST00000212800 5943 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Snora35-201ENSMUST00000104579 128 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm14836-201ENSMUST00000118567 471 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm14938-201ENSMUST00000119482 943 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm22847-201ENSMUST00000157707 105 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm11107-201ENSMUST00000165414 505 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm7492-201ENSMUST00000201745 725 ntBASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.74□□□□□ -1.33
Spg11Q3UHA3 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms