Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Ctdnep1Q3TP92 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm12459-201ENSMUST00000120659 356 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm11263-201ENSMUST00000121853 749 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm22342-201ENSMUST00000122647 298 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm23276-201ENSMUST00000157913 138 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm7502-201ENSMUST00000169235 733 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm7481-201ENSMUST00000182020 995 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm2287-201ENSMUST00000197417 1084 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm19217-201ENSMUST00000218238 328 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm35638-201ENSMUST00000220724 652 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Olfr683-201ENSMUST00000061284 960 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Gm14615-201ENSMUST00000117575 1816 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.24□□□□□ -1.09
Ctdnep1Q3TP92 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm14279-201ENSMUST00000117142 332 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm10243-201ENSMUST00000117571 333 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm7910-201ENSMUST00000117896 835 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm14727-201ENSMUST00000118526 525 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm14721-201ENSMUST00000121381 525 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm15538-201ENSMUST00000121410 313 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm6472-202ENSMUST00000187973 582 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm10247-201ENSMUST00000090395 333 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ctdnep1Q3TP92 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms