Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm14864-201ENSMUST00000116164 1087 ntBASIC9.22□□□□□ -0.93
Msh6P54276 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm3760-201ENSMUST00000167475 804 ntBASIC9.22□□□□□ -0.93
Msh6P54276 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm7019-201ENSMUST00000194122 369 ntBASIC9.22□□□□□ -0.93
Msh6P54276 Gm45497-201ENSMUST00000211701 740 ntBASIC9.22□□□□□ -0.93
Msh6P54276 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.22□□□□□ -0.93
Msh6P54276 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Msh6P54276 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Msh6P54276 Gm24924-201ENSMUST00000084007 164 ntBASIC9.22□□□□□ -0.93
Msh6P54276 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Msh6P54276 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Msh6P54276 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Msh6P54276 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Msh6P54276 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Msh6P54276 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Msh6P54276 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Msh6P54276 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Msh6P54276 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Msh6P54276 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Msh6P54276 AC158605.4-201ENSMUST00000219013 3361 ntBASIC9.21□□□□□ -0.94
Msh6P54276 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Gm7613-201ENSMUST00000139070 487 ntBASIC9.21□□□□□ -0.94
Msh6P54276 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC9.21□□□□□ -0.94
Msh6P54276 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC9.21□□□□□ -0.94
Msh6P54276 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Msh6P54276 Gm8058-201ENSMUST00000217247 587 ntBASIC9.21□□□□□ -0.94
Msh6P54276 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Msh6P54276 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Gm15109-201ENSMUST00000133085 2026 ntBASIC9.21□□□□□ -0.94
Msh6P54276 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Msh6P54276 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Msh6P54276 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.21□□□□□ -0.94
Msh6P54276 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Gm232-201ENSMUST00000216549 2559 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Msh6P54276 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Msh6P54276 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.2□□□□□ -0.94
Msh6P54276 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.2□□□□□ -0.94
Msh6P54276 Gm29048-201ENSMUST00000185342 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29403-201ENSMUST00000185491 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm21877-201ENSMUST00000185640 694 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28234-201ENSMUST00000185657 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28248-201ENSMUST00000186093 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29633-202ENSMUST00000186217 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28829-201ENSMUST00000186231 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28261-201ENSMUST00000186417 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28815-201ENSMUST00000186751 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28608-201ENSMUST00000186860 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Msh6P54276 Gm28122-201ENSMUST00000187088 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28420-201ENSMUST00000187340 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28106-201ENSMUST00000187640 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28698-201ENSMUST00000187734 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29224-201ENSMUST00000187965 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29189-201ENSMUST00000188018 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29476-201ENSMUST00000188397 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29505-201ENSMUST00000188424 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28125-201ENSMUST00000188470 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29391-201ENSMUST00000188545 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29280-201ENSMUST00000188571 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28349-201ENSMUST00000188590 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29652-201ENSMUST00000188622 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28819-206ENSMUST00000188816 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29079-201ENSMUST00000188875 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28213-201ENSMUST00000189183 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29382-201ENSMUST00000189549 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm29377-205ENSMUST00000189603 615 ntBASIC9.2□□□□□ -0.94
Msh6P54276 Gm28327-201ENSMUST00000189638 615 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms