Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm5975-201ENSMUST00000185256 1399 ntBASIC9.08□□□□□ -0.96
Rfx1P48377 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rfx1P48377 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm6350-201ENSMUST00000195099 1339 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Mir675-201ENSMUST00000102320 84 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm23131-201ENSMUST00000104253 132 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm26344-201ENSMUST00000104553 132 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC9.07□□□□□ -0.96
Rfx1P48377 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Rhox4d-201ENSMUST00000115175 936 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm9432-201ENSMUST00000117810 759 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm13680-201ENSMUST00000119790 793 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm12993-201ENSMUST00000119900 479 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm12692-201ENSMUST00000121092 546 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm11895-201ENSMUST00000122165 467 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm23587-201ENSMUST00000157658 84 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rfx1P48377 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC9.07□□□□□ -0.96
Rfx1P48377 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Rfx1P48377 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Mir7230-201ENSMUST00000195977 56 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm17838-201ENSMUST00000205872 876 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC9.07□□□□□ -0.96
Rfx1P48377 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm18024-201ENSMUST00000218516 690 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 AC121986.1-201ENSMUST00000218588 781 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Gm9110-201ENSMUST00000219035 617 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 AC126554.4-201ENSMUST00000221055 409 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 AC163684.1-201ENSMUST00000223766 927 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 AC163667.2-201ENSMUST00000223769 791 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Rfx1P48377 AC161252.2-201ENSMUST00000224978 374 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 CT009728.1-201ENSMUST00000225228 1050 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 AC124196.1-201ENSMUST00000225970 1032 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm8623-201ENSMUST00000071573 436 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rfx1P48377 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 AC123665.5-201ENSMUST00000226648 1392 ntBASIC9.07□□□□□ -0.96
Rfx1P48377 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rfx1P48377 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rfx1P48377 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Rfx1P48377 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.06□□□□□ -0.96
Rfx1P48377 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Rfx1P48377 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm37067-201ENSMUST00000195730 1628 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm43422-201ENSMUST00000199780 3571 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 AC129208.1-201ENSMUST00000227474 2906 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC9.06□□□□□ -0.96
Rfx1P48377 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm22900-201ENSMUST00000104538 130 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC9.06□□□□□ -0.96
Rfx1P48377 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm23840-201ENSMUST00000116950 97 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm7910-201ENSMUST00000117896 835 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm14943-201ENSMUST00000118056 546 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm14826-201ENSMUST00000121284 901 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms