Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
HttP42859 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Gm22599-201ENSMUST00000157597 132 ntBASIC7.37□□□□□ -1.23
HttP42859 Gm19560-201ENSMUST00000177510 514 ntBASIC7.37□□□□□ -1.23
HttP42859 Gm26729-201ENSMUST00000180744 352 ntBASIC7.37□□□□□ -1.23
HttP42859 Gm3785-201ENSMUST00000221000 202 ntBASIC7.37□□□□□ -1.23
HttP42859 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.37□□□□□ -1.23
HttP42859 AC154657.1-201ENSMUST00000226394 775 ntBASIC7.37□□□□□ -1.23
HttP42859 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
HttP42859 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
HttP42859 Gm43839-201ENSMUST00000196183 2325 ntBASIC7.37□□□□□ -1.23
HttP42859 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HttP42859 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 AC122346.2-201ENSMUST00000224326 2931 ntBASIC7.37□□□□□ -1.23
HttP42859 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.37□□□□□ -1.23
HttP42859 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HttP42859 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.37□□□□□ -1.23
HttP42859 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Gm26289-201ENSMUST00000104169 131 ntBASIC7.37□□□□□ -1.23
HttP42859 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
HttP42859 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.37□□□□□ -1.23
HttP42859 Gm15422-201ENSMUST00000117453 541 ntBASIC7.37□□□□□ -1.23
HttP42859 Gm3943-201ENSMUST00000118606 718 ntBASIC7.37□□□□□ -1.23
HttP42859 Gm8860-201ENSMUST00000193160 445 ntBASIC7.37□□□□□ -1.23
HttP42859 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.37□□□□□ -1.23
HttP42859 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HttP42859 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
HttP42859 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.37□□□□□ -1.23
HttP42859 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gm15209-201ENSMUST00000117703 400 ntBASIC7.36□□□□□ -1.23
HttP42859 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.36□□□□□ -1.23
HttP42859 Gm4332-201ENSMUST00000196114 346 ntBASIC7.36□□□□□ -1.23
HttP42859 Gm44312-201ENSMUST00000203536 469 ntBASIC7.36□□□□□ -1.23
HttP42859 Gm44184-201ENSMUST00000204290 132 ntBASIC7.36□□□□□ -1.23
HttP42859 Gm18103-201ENSMUST00000216621 779 ntBASIC7.36□□□□□ -1.23
HttP42859 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HttP42859 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.36□□□□□ -1.23
HttP42859 Dennd6a-204ENSMUST00000224248 2775 ntBASIC7.36□□□□□ -1.23
HttP42859 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.36□□□□□ -1.23
HttP42859 Gm37358-201ENSMUST00000195492 479 ntBASIC7.36□□□□□ -1.23
HttP42859 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Gm5654-201ENSMUST00000217787 475 ntBASIC7.36□□□□□ -1.23
HttP42859 AC110381.1-201ENSMUST00000218987 586 ntBASIC7.36□□□□□ -1.23
HttP42859 AC132833.4-201ENSMUST00000228313 203 ntBASIC7.36□□□□□ -1.23
HttP42859 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.36□□□□□ -1.23
HttP42859 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
HttP42859 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.36□□□□□ -1.23
HttP42859 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HttP42859 Gm45850-201ENSMUST00000212536 338 ntBASIC7.36□□□□□ -1.23
HttP42859 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.36□□□□□ -1.23
HttP42859 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HttP42859 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.35□□□□□ -1.23
HttP42859 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.35□□□□□ -1.23
HttP42859 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
HttP42859 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.35□□□□□ -1.23
HttP42859 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC7.35□□□□□ -1.23
HttP42859 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm11585-201ENSMUST00000120901 569 ntBASIC7.35□□□□□ -1.23
HttP42859 Gm23674-201ENSMUST00000157473 131 ntBASIC7.35□□□□□ -1.23
HttP42859 Gm23662-201ENSMUST00000158046 111 ntBASIC7.35□□□□□ -1.23
HttP42859 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HttP42859 Gm18447-201ENSMUST00000187501 307 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms