Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Sox6P40645 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm12344-201ENSMUST00000117087 329 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm12219-201ENSMUST00000119198 443 ntBASIC6.79□□□□□ -1.32
Sox6P40645 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm25437-201ENSMUST00000158282 132 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm9286-201ENSMUST00000173586 508 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm22408-201ENSMUST00000174925 65 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Sox6P40645 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox6P40645 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm8004-201ENSMUST00000187782 617 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox6P40645 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm28341-201ENSMUST00000190883 472 ntBASIC6.79□□□□□ -1.32
Sox6P40645 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm38305-201ENSMUST00000194825 223 ntBASIC6.79□□□□□ -1.32
Sox6P40645 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm18469-201ENSMUST00000208850 439 ntBASIC6.79□□□□□ -1.32
Sox6P40645 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.79□□□□□ -1.32
Sox6P40645 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.79□□□□□ -1.32
Sox6P40645 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.79□□□□□ -1.32
Sox6P40645 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Gm24046-201ENSMUST00000083111 165 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox6P40645 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.79□□□□□ -1.32
Sox6P40645 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox6P40645 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Sox6P40645 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gm44509-201ENSMUST00000205400 1324 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Klf5-202ENSMUST00000226784 2852 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox6P40645 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm14891-201ENSMUST00000117378 596 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm15576-201ENSMUST00000117806 583 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm11416-201ENSMUST00000119111 863 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm14202-201ENSMUST00000120121 311 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms