Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Mir1929-201ENSMUST00000158635 93 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm8837-201ENSMUST00000161037 1107 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm38068-201ENSMUST00000192546 540 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm17965-201ENSMUST00000193904 517 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm43762-201ENSMUST00000201521 295 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm2221-201ENSMUST00000209342 418 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm45279-201ENSMUST00000210315 391 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Cxcl12P40224 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC7.55□□□□□ -1.2
Cxcl12P40224 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm9506-201ENSMUST00000118516 320 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm15047-201ENSMUST00000118891 454 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm24011-201ENSMUST00000157732 268 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm9672-201ENSMUST00000166437 425 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm24756-201ENSMUST00000177002 96 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm36965-201ENSMUST00000193797 394 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Cxcl12P40224 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC7.54□□□□□ -1.2
Cxcl12P40224 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.54□□□□□ -1.2
Cxcl12P40224 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Cxcl12P40224 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.53□□□□□ -1.2
Cxcl12P40224 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm232-201ENSMUST00000216549 2559 ntBASIC7.53□□□□□ -1.2
Cxcl12P40224 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Cxcl12P40224 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm24343-201ENSMUST00000158708 111 ntBASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Cxcl12P40224 Gm5611-201ENSMUST00000164523 852 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms