Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm12608-201ENSMUST00000122013 1715 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC9.5□□□□□ -0.89
Col18a1P39061 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm6921-201ENSMUST00000161478 435 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC9.5□□□□□ -0.89
Col18a1P39061 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 AC174797.2-203ENSMUST00000224017 716 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm38315-201ENSMUST00000194286 2437 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Col18a1P39061 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC9.49□□□□□ -0.89
Col18a1P39061 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.49□□□□□ -0.89
Col18a1P39061 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Col18a1P39061 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Gm9440-201ENSMUST00000119667 539 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Gm16027-201ENSMUST00000161618 758 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Mir3097-201ENSMUST00000175356 67 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm15257-201ENSMUST00000177680 883 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm15252-201ENSMUST00000177750 883 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm15256-201ENSMUST00000177793 883 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm15260-201ENSMUST00000179402 883 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Ighv1-44-201ENSMUST00000195597 352 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm42753-201ENSMUST00000196718 1268 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm44943-201ENSMUST00000207254 300 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm9535-201ENSMUST00000218499 768 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.49□□□□□ -0.89
Col18a1P39061 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Col18a1P39061 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.49□□□□□ -0.89
Col18a1P39061 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Col18a1P39061 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Col18a1P39061 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col18a1P39061 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Col18a1P39061 Sf3b3-201ENSMUST00000042012 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col18a1P39061 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Gm22371-201ENSMUST00000104588 130 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm14805-201ENSMUST00000120172 340 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm24380-201ENSMUST00000122696 324 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC9.48□□□□□ -0.89
Col18a1P39061 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Gm9658-201ENSMUST00000182757 1012 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm5717-201ENSMUST00000198243 1062 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm7492-201ENSMUST00000201745 725 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm18944-201ENSMUST00000207672 643 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 AC113031.6-202ENSMUST00000228468 1145 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Gm19031-201ENSMUST00000176280 1365 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Gm10773-201ENSMUST00000218071 3935 ntBASIC9.48□□□□□ -0.89
Col18a1P39061 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Col18a1P39061 Gm15422-201ENSMUST00000117453 541 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm14301-201ENSMUST00000120181 324 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm26162-201ENSMUST00000157793 132 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm25363-201ENSMUST00000158850 245 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm18595-201ENSMUST00000175736 1068 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm44911-201ENSMUST00000208436 1062 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm8679-201ENSMUST00000210651 1036 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm18586-201ENSMUST00000217265 518 ntBASIC9.47□□□□□ -0.89
Col18a1P39061 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Col18a1P39061 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms