Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp4P35123 Gm14891-201ENSMUST00000117378 596 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm15576-201ENSMUST00000117806 583 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm13407-201ENSMUST00000118256 360 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm11474-201ENSMUST00000120814 277 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm15730-201ENSMUST00000121828 415 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm11895-201ENSMUST00000122165 467 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm13828-201ENSMUST00000122278 363 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm24883-201ENSMUST00000158391 281 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Usp4P35123 Gm19840-201ENSMUST00000169624 882 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Usp4P35123 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm26784-201ENSMUST00000181666 410 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.83□□□□□ -1.16
Usp4P35123 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.83□□□□□ -1.16
Usp4P35123 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm7560-201ENSMUST00000187748 873 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm29195-201ENSMUST00000189038 379 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm28728-201ENSMUST00000189087 405 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm28864-201ENSMUST00000189251 644 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC7.83□□□□□ -1.16
Usp4P35123 Gm44213-201ENSMUST00000204977 703 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm18469-201ENSMUST00000208850 439 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.83□□□□□ -1.16
Usp4P35123 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm19186-201ENSMUST00000219922 333 ntBASIC7.83□□□□□ -1.16
Usp4P35123 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.83□□□□□ -1.16
Usp4P35123 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.83□□□□□ -1.16
Usp4P35123 AC125019.1-201ENSMUST00000224809 908 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm9801-201ENSMUST00000054860 408 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Usp4P35123 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.83□□□□□ -1.16
Usp4P35123 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.83□□□□□ -1.16
Usp4P35123 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Usp4P35123 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Usp4P35123 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Usp4P35123 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Gm24048-201ENSMUST00000102411 106 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm13742-201ENSMUST00000118805 457 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm11416-201ENSMUST00000119111 863 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm8084-201ENSMUST00000120807 752 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.82□□□□□ -1.16
Usp4P35123 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Gm6610-201ENSMUST00000186324 358 ntBASIC7.82□□□□□ -1.16
Usp4P35123 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.82□□□□□ -1.16
Usp4P35123 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp4P35123 Gm19161-201ENSMUST00000217958 737 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm18972-201ENSMUST00000218873 630 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Gm21321-201ENSMUST00000220179 446 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC7.82□□□□□ -1.16
Usp4P35123 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.82□□□□□ -1.16
Usp4P35123 AC124196.1-201ENSMUST00000225970 1032 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp4P35123 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp4P35123 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp4P35123 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.82□□□□□ -1.16
Usp4P35123 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC7.82□□□□□ -1.16
Usp4P35123 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp4P35123 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms