Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm32347-201ENSMUST00000192944 696 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.19□□□□□ -1.1
Col2a1P28481 Gm38121-201ENSMUST00000193213 696 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 Gm38035-201ENSMUST00000194427 696 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 Gm38350-201ENSMUST00000194789 696 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 Gm37990-201ENSMUST00000195821 696 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 Gm20128-201ENSMUST00000196189 417 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 Gm4860-201ENSMUST00000200368 454 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col2a1P28481 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC8.19□□□□□ -1.1
Col2a1P28481 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.19□□□□□ -1.1
Col2a1P28481 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.19□□□□□ -1.1
Col2a1P28481 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col2a1P28481 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col2a1P28481 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.18□□□□□ -1.1
Col2a1P28481 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col2a1P28481 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col2a1P28481 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm43496-201ENSMUST00000201682 3001 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col2a1P28481 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.18□□□□□ -1.1
Col2a1P28481 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col2a1P28481 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm22256-201ENSMUST00000102291 107 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Mir674-201ENSMUST00000102421 100 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Gm2178-201ENSMUST00000104927 357 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Gm14612-201ENSMUST00000121522 881 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm25395-201ENSMUST00000157343 272 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm28117-201ENSMUST00000188472 371 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Gm29141-201ENSMUST00000190357 882 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col2a1P28481 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm17834-201ENSMUST00000204322 891 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Gm9110-201ENSMUST00000219035 617 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC8.18□□□□□ -1.1
Col2a1P28481 AC123665.3-201ENSMUST00000228735 1216 ntBASIC8.18□□□□□ -1.1
Col2a1P28481 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col2a1P28481 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col2a1P28481 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Col2a1P28481 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col2a1P28481 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm14893-201ENSMUST00000117904 282 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm15242-201ENSMUST00000122459 283 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.17□□□□□ -1.1
Col2a1P28481 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col2a1P28481 Mir5617-201ENSMUST00000176786 57 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.17□□□□□ -1.1
Col2a1P28481 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm10136-201ENSMUST00000183196 435 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm28958-201ENSMUST00000185864 703 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm7867-201ENSMUST00000189856 546 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm43377-201ENSMUST00000201640 455 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms