Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdx1P18111 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdx1P18111 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx1P18111 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx1P18111 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx1P18111 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm11853-201ENSMUST00000119687 1384 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm38262-201ENSMUST00000194760 1382 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdx1P18111 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm25273-201ENSMUST00000104295 115 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm11348-201ENSMUST00000118813 318 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm6275-201ENSMUST00000118971 1122 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm15007-201ENSMUST00000119982 710 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm15049-201ENSMUST00000120474 463 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm13415-202ENSMUST00000135829 565 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm24130-201ENSMUST00000158536 151 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm20430-201ENSMUST00000172474 207 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdx1P18111 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Cdx1P18111 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm28980-201ENSMUST00000187877 219 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm29143-201ENSMUST00000189462 201 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm5244-202ENSMUST00000189517 743 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm7369-201ENSMUST00000192738 936 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm37977-201ENSMUST00000193096 721 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm37689-201ENSMUST00000193139 275 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm9729-201ENSMUST00000196364 265 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm19148-201ENSMUST00000197045 429 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm5981-201ENSMUST00000199912 487 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm8489-201ENSMUST00000209876 1152 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdx1P18111 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 AC092710.1-201ENSMUST00000221005 192 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 CT009733.1-202ENSMUST00000224941 441 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 AC171241.2-201ENSMUST00000228744 892 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 AC165155.1-201ENSMUST00000228932 445 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdx1P18111 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Cdx1P18111 Mir24-2-201ENSMUST00000083607 107 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm8836-201ENSMUST00000198196 1348 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx1P18111 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx1P18111 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.94□□□□□ -1.46
Cdx1P18111 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Cdx1P18111 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.93□□□□□ -1.46
Cdx1P18111 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdx1P18111 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdx1P18111 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Cdx1P18111 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdx1P18111 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cdx1P18111 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdx1P18111 Gm44863-201ENSMUST00000207613 1422 ntBASIC5.93□□□□□ -1.46
Cdx1P18111 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.93□□□□□ -1.46
Cdx1P18111 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Cdx1P18111 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Cdx1P18111 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cdx1P18111 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Cdx1P18111 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cdx1P18111 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms