Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Lire1P11260 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm9836-201ENSMUST00000117132 216 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm12310-201ENSMUST00000118013 492 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm11443-201ENSMUST00000118790 479 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm9378-201ENSMUST00000120315 471 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.17□□□□□ -1.26
Lire1P11260 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm24647-201ENSMUST00000157112 113 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.17□□□□□ -1.26
Lire1P11260 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Lire1P11260 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC7.17□□□□□ -1.26
Lire1P11260 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.17□□□□□ -1.26
Lire1P11260 Gm28193-201ENSMUST00000189863 615 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm37392-201ENSMUST00000192098 516 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm18207-201ENSMUST00000205486 526 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm44561-201ENSMUST00000208869 264 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm19196-201ENSMUST00000209258 357 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.17□□□□□ -1.26
Lire1P11260 CT009754.4-201ENSMUST00000221430 565 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm11360-201ENSMUST00000221898 262 ntBASIC7.17□□□□□ -1.26
Lire1P11260 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Gm7086-202ENSMUST00000228849 506 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Olfr888-201ENSMUST00000075228 945 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lire1P11260 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 AC122878.1-201ENSMUST00000227716 1460 ntBASIC7.17□□□□□ -1.26
Lire1P11260 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.17□□□□□ -1.26
Lire1P11260 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC7.17□□□□□ -1.26
Lire1P11260 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.16□□□□□ -1.26
Lire1P11260 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
Lire1P11260 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm14036-201ENSMUST00000118248 480 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm15481-201ENSMUST00000120264 539 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm12459-201ENSMUST00000120659 356 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Mir1932-201ENSMUST00000157390 90 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm24738-201ENSMUST00000158856 123 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm27019-201ENSMUST00000183056 404 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm6610-201ENSMUST00000186324 358 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm18342-201ENSMUST00000186987 694 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm2427-201ENSMUST00000189121 881 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.16□□□□□ -1.26
Lire1P11260 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm22711-202ENSMUST00000197029 135 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm39121-201ENSMUST00000208847 525 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm4536-201ENSMUST00000209157 542 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.16□□□□□ -1.26
Lire1P11260 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Lire1P11260 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.16□□□□□ -1.26
Lire1P11260 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lire1P11260 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.16□□□□□ -1.26
Lire1P11260 Gm19031-201ENSMUST00000176280 1365 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms