Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm15753-201ENSMUST00000119241 1062 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm12124-201ENSMUST00000120504 679 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm14414-201ENSMUST00000120833 573 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Mir199b-201ENSMUST00000175066 110 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm26269-201ENSMUST00000180144 126 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Mir6340-201ENSMUST00000183857 119 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm27288-201ENSMUST00000184215 80 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm27597-201ENSMUST00000184365 80 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm27506-201ENSMUST00000184558 80 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm27529-201ENSMUST00000184975 80 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm27907-201ENSMUST00000185101 80 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm44982-201ENSMUST00000208795 471 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm45475-201ENSMUST00000209381 309 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC5.84□□□□□ -1.47
Hmgb3O54879 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC5.84□□□□□ -1.47
Hmgb3O54879 AL590616.1-201ENSMUST00000223339 574 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hmgb3O54879 AC165260.5-201ENSMUST00000224640 1247 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 AC163038.4-201ENSMUST00000224942 474 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 AC160109.1-201ENSMUST00000225592 729 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Hmgb3O54879 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm10855-201ENSMUST00000100426 2541 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm5752-201ENSMUST00000117771 594 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm13137-201ENSMUST00000118035 345 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm12477-201ENSMUST00000121221 571 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm13282-201ENSMUST00000121577 545 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm15096-201ENSMUST00000121918 878 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm14212-201ENSMUST00000122023 826 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Mir1907-201ENSMUST00000122509 90 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm25178-201ENSMUST00000122633 325 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm24063-201ENSMUST00000157491 105 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm27018-201ENSMUST00000181136 225 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm26977-201ENSMUST00000183151 996 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC5.83□□□□□ -1.48
Hmgb3O54879 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC5.83□□□□□ -1.48
Hmgb3O54879 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm5717-201ENSMUST00000198243 1062 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm43805-201ENSMUST00000198488 824 ntBASIC5.83□□□□□ -1.48
Hmgb3O54879 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms