Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm12939-201ENSMUST00000117303 165 ntBASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm11445-201ENSMUST00000119101 532 ntBASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm25969-201ENSMUST00000157166 132 ntBASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm21877-201ENSMUST00000185640 694 ntBASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm11434-201ENSMUST00000122379 629 ntBASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm24756-201ENSMUST00000177002 96 ntBASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm5514-201ENSMUST00000060477 306 ntBASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc180J3QNE4 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm25785-201ENSMUST00000104129 125 ntBASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Mir1900-201ENSMUST00000122714 78 ntBASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm9285-201ENSMUST00000177691 697 ntBASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 AL929555.1-201ENSMUST00000215283 509 ntBASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm44104-201ENSMUST00000204736 3777 ntBASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc180J3QNE4 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 Gm7426-201ENSMUST00000179046 404 ntBASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 Gm37191-201ENSMUST00000193346 388 ntBASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 Gm19088-201ENSMUST00000198800 566 ntBASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 AC164295.1-201ENSMUST00000224861 186 ntBASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 AC164436.1-201ENSMUST00000227074 772 ntBASIC13.15□□□□□ -0.31
Ccdc180J3QNE4 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Mir760-201ENSMUST00000103257 119 ntBASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc180J3QNE4 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc180J3QNE4 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms