Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm14865-201ENSMUST00000117523 494 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm14054-201ENSMUST00000120744 704 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm25178-201ENSMUST00000122633 325 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm25435-201ENSMUST00000158277 267 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm28958-201ENSMUST00000185864 703 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 AC105324.1-201ENSMUST00000227844 386 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Gm37549-201ENSMUST00000194096 4065 ntBASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.4□□□□□ -1.22
Col4a6B1AVK5 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.4□□□□□ -1.22
Col4a6B1AVK5 AC138284.3-201ENSMUST00000217345 4663 ntBASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Gm43621-201ENSMUST00000202733 2022 ntBASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.4□□□□□ -1.22
Col4a6B1AVK5 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm29784-201ENSMUST00000196217 406 ntBASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm30708-201ENSMUST00000202183 312 ntBASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm44565-201ENSMUST00000208194 269 ntBASIC7.4□□□□□ -1.23
Col4a6B1AVK5 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC7.4□□□□□ -1.23
Col4a6B1AVK5 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Col4a6B1AVK5 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Dgkh-206ENSMUST00000228362 3308 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm16027-201ENSMUST00000161618 758 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm8190-201ENSMUST00000199603 586 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm43867-201ENSMUST00000203860 525 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Gm8607-201ENSMUST00000221864 431 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a6B1AVK5 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms