Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC164883.2-201ENSMUST00000227931 3815 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Hnrnph2-204ENSMUST00000113202 3988 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm14273-201ENSMUST00000136315 1786 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm13359-201ENSMUST00000119000 695 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm9516-201ENSMUST00000119684 424 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm14425-201ENSMUST00000121240 606 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm16238-201ENSMUST00000159343 586 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Zfp419-201ENSMUST00000173446 916 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm20451-201ENSMUST00000173452 273 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm22649-201ENSMUST00000175134 298 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm8669-201ENSMUST00000183839 945 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm20813-201ENSMUST00000186646 705 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm28859-201ENSMUST00000186650 616 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm21617-201ENSMUST00000188297 691 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 4930535E02Rik-201ENSMUST00000194463 655 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm2939-201ENSMUST00000198496 478 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm44862-201ENSMUST00000207981 1055 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm4796-201ENSMUST00000219802 624 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 AC155269.1-201ENSMUST00000220843 769 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Arhgef33-207ENSMUST00000224966 490 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 AC115735.3-201ENSMUST00000227757 513 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm6187-201ENSMUST00000040649 960 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Olfr888-201ENSMUST00000075228 945 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm5560-201ENSMUST00000086918 892 ntBASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Fas-201ENSMUST00000025691 1486 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim39Q9ESN2 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 AC122887.1-201ENSMUST00000219265 2722 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm15233-201ENSMUST00000118747 400 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm11359-201ENSMUST00000120039 567 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm3571-201ENSMUST00000170703 1060 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm27403-201ENSMUST00000184662 214 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm28803-201ENSMUST00000190385 764 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm35067-201ENSMUST00000194355 647 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Igkv12-49-201ENSMUST00000197714 278 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm6261-201ENSMUST00000204707 760 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm3198-201ENSMUST00000208725 1026 ntBASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim39Q9ESN2 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms