Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Gm18995-201ENSMUST00000202981 520 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Gm44892-201ENSMUST00000208595 488 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Gm19007-201ENSMUST00000217746 874 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Cdc40Q9DC48 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Mir503-201ENSMUST00000102168 71 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm13744-201ENSMUST00000118953 850 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm12601-201ENSMUST00000118994 846 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm14631-201ENSMUST00000119067 594 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm16056-201ENSMUST00000119293 135 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm11895-201ENSMUST00000122165 467 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm23077-201ENSMUST00000157854 116 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm23007-201ENSMUST00000158951 177 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm6004-201ENSMUST00000173237 1116 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm5445-201ENSMUST00000180224 480 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm28164-201ENSMUST00000190143 442 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm43235-201ENSMUST00000200121 297 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm45506-201ENSMUST00000211620 280 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm6667-201ENSMUST00000217169 564 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.81□□□□□ -1.32
Cdc40Q9DC48 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdc40Q9DC48 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm25614-201ENSMUST00000104013 133 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm12459-201ENSMUST00000120659 356 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm24442-201ENSMUST00000157238 327 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm25164-201ENSMUST00000158908 116 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm9381-201ENSMUST00000182285 1012 ntBASIC6.8□□□□□ -1.32
Cdc40Q9DC48 Gm27026-201ENSMUST00000183003 892 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms