Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm13552-201ENSMUST00000118837 417 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm13744-201ENSMUST00000118953 850 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm15129-201ENSMUST00000119673 279 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm12692-201ENSMUST00000121092 546 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm25179-201ENSMUST00000122632 128 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm24442-201ENSMUST00000157238 327 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm20561-201ENSMUST00000188131 292 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm4859-201ENSMUST00000199625 787 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm45240-201ENSMUST00000211437 674 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm33778-201ENSMUST00000216884 704 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm46317-201ENSMUST00000221103 393 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 AC154484.2-201ENSMUST00000228359 818 ntBASIC8.4□□□□□ -1.06
Clp1Q99LI9 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Clp1Q99LI9 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Clp1Q99LI9 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.4□□□□□ -1.07
Clp1Q99LI9 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.4□□□□□ -1.07
Clp1Q99LI9 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 Gm40309-201ENSMUST00000202699 1752 ntBASIC8.4□□□□□ -1.07
Clp1Q99LI9 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Clp1Q99LI9 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm45714-201ENSMUST00000211466 2722 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm43845-201ENSMUST00000202462 1820 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm12697-201ENSMUST00000118008 667 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm5759-201ENSMUST00000119203 811 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm4773-201ENSMUST00000120392 702 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm371-201ENSMUST00000142240 1245 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm23059-201ENSMUST00000158978 107 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm16558-201ENSMUST00000163015 532 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 AC153975.1-201ENSMUST00000220087 926 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 AC134439.1-201ENSMUST00000220923 600 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Clp1Q99LI9 Mir455-201ENSMUST00000093594 82 ntBASIC8.39□□□□□ -1.07
Clp1Q99LI9 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms