Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm24300-201ENSMUST00000177809 109 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm24017-201ENSMUST00000178726 109 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm23952-201ENSMUST00000179380 109 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm18875-201ENSMUST00000188563 882 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm44471-201ENSMUST00000197963 100 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Mir455-201ENSMUST00000093594 82 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm25757-201ENSMUST00000103986 123 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm11810-201ENSMUST00000118311 333 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm18699-201ENSMUST00000190713 243 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm42424-201ENSMUST00000198319 376 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm7285-201ENSMUST00000198801 580 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm45782-201ENSMUST00000212670 366 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Nup88Q8CEC0 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm13768-201ENSMUST00000116469 929 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm11343-201ENSMUST00000120579 599 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm15362-201ENSMUST00000121459 388 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm24139-201ENSMUST00000122780 288 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Mir1983-201ENSMUST00000157523 132 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm8715-201ENSMUST00000162728 531 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm20702-201ENSMUST00000176181 460 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Nup88Q8CEC0 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms