Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm7678-201ENSMUST00000181879 943 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm29355-201ENSMUST00000188178 697 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm28953-201ENSMUST00000188336 697 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm29175-201ENSMUST00000189500 402 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm20788-201ENSMUST00000190538 697 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm35108-201ENSMUST00000194321 699 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm37395-201ENSMUST00000194721 697 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm33191-201ENSMUST00000195604 699 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm44356-201ENSMUST00000196731 111 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm16475-202ENSMUST00000209033 528 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm5250-201ENSMUST00000059065 321 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc38Q8CDN8 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm8700-201ENSMUST00000222187 3054 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm14645-201ENSMUST00000118597 417 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm22795-201ENSMUST00000157233 118 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm27458-201ENSMUST00000185108 121 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm37295-201ENSMUST00000192186 109 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm20223-201ENSMUST00000199932 805 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm5948-201ENSMUST00000219627 839 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Gm6807-201ENSMUST00000077435 888 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.15□□□□□ -1.1
Ccdc38Q8CDN8 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ccdc38Q8CDN8 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm43747-201ENSMUST00000201412 1330 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm11928-201ENSMUST00000119323 437 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms