Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm13438-201ENSMUST00000120100 573 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm12632-201ENSMUST00000121223 495 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm14830-201ENSMUST00000121899 700 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm7031-201ENSMUST00000173709 919 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm25692-201ENSMUST00000175444 125 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm8524-201ENSMUST00000186232 379 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 AC154506.2-201ENSMUST00000225481 1276 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Gm5564-201ENSMUST00000034916 967 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Mir135b-201ENSMUST00000083501 97 ntBASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nhlrc3Q8CCH2 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm11207-201ENSMUST00000117824 414 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm1947-201ENSMUST00000122451 910 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm22795-201ENSMUST00000157233 118 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm4781-201ENSMUST00000167995 781 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm27972-201ENSMUST00000184720 137 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm37689-201ENSMUST00000193139 275 ntBASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Nhlrc3Q8CCH2 Gm18765-201ENSMUST00000203166 660 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms