Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm45100-201ENSMUST00000209153 391 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm4796-201ENSMUST00000219802 624 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Atg4aQ8C9S8 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Atg4aQ8C9S8 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm23437-201ENSMUST00000104036 127 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm14893-201ENSMUST00000117904 282 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm14584-201ENSMUST00000118956 637 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm12477-201ENSMUST00000121221 571 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm23740-201ENSMUST00000157385 100 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm24228-201ENSMUST00000158829 129 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm23639-201ENSMUST00000175078 132 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm44982-201ENSMUST00000208795 471 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm6667-201ENSMUST00000217169 564 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 n-R5s156-201ENSMUST00000083377 105 ntBASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Atg4aQ8C9S8 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm12740-201ENSMUST00000118794 308 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm43108-201ENSMUST00000200525 293 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm44380-201ENSMUST00000203125 293 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm43926-201ENSMUST00000203978 430 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm5305-201ENSMUST00000204010 746 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm44722-201ENSMUST00000206473 436 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm32899-201ENSMUST00000219694 207 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Atg4aQ8C9S8 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms