Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm5514-201ENSMUST00000060477 306 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ccdc60Q8C4J0 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 CT010470.1-201ENSMUST00000225364 1876 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm25757-201ENSMUST00000103986 123 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm23437-201ENSMUST00000104036 127 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm11653-201ENSMUST00000119992 1009 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm26480-201ENSMUST00000122619 297 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm25178-201ENSMUST00000122633 325 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm24057-201ENSMUST00000158616 302 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm7426-201ENSMUST00000179046 404 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm43656-201ENSMUST00000197882 434 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm43212-201ENSMUST00000198208 394 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm8539-201ENSMUST00000199822 501 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm43235-201ENSMUST00000200121 297 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm44722-201ENSMUST00000206473 436 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm34424-201ENSMUST00000213400 782 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.15□□□□□ -0.94
Ccdc60Q8C4J0 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ccdc60Q8C4J0 CT009480.1-201ENSMUST00000225771 4480 ntBASIC9.15□□□□□ -0.95
Ccdc60Q8C4J0 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ccdc60Q8C4J0 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm38009-201ENSMUST00000194884 3341 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm13878-201ENSMUST00000117986 577 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm11517-201ENSMUST00000119491 387 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm22275-201ENSMUST00000122470 310 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm25505-201ENSMUST00000157220 246 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm7420-201ENSMUST00000162836 842 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm28114-201ENSMUST00000187232 379 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm5305-201ENSMUST00000204010 746 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm44971-201ENSMUST00000206192 337 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm45042-201ENSMUST00000207377 211 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm18860-201ENSMUST00000212029 764 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm35638-201ENSMUST00000220724 652 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm21152-201ENSMUST00000190271 3483 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc60Q8C4J0 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm11853-201ENSMUST00000119687 1384 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm15229-201ENSMUST00000146636 1398 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Gm19801-201ENSMUST00000218231 1882 ntBASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC9.13□□□□□ -0.95
Ccdc60Q8C4J0 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms